Date | Machine Type | Chemistry Type |
---|---|---|
2017-05-09 | HiSeq4000 | Unknown |
Total Reads | Total Non-Phix | Mean | SD | Median | Mean/Median | Cv | Min Good Read | Max Good Read | Range (Orders of Magnitude) |
---|---|---|---|---|---|---|---|---|---|
1859616 | 1859616 | 38742 | 10462.97 | 39876 | 0.9715618 | 0.2700678 | 16225 | 71005 | 0.6411042 |
Ambiguous_Barcodes | Low_Quality | Ambiguous_Radtag | Total_Removed |
---|---|---|---|
17194 | 0 | 112972 | 130166 |
Barcode | Library | NumReads | NumReadsPhix | NumReadsGood | PercentObtained | PercentExpected | Difference | |
---|---|---|---|---|---|---|---|---|
3 | CGATC | CA-015_14_Hlobatus_5L1 | 16225 | 0 | 16225 | 0.0087249 | 0.0208333 | -0.0121084 |
44 | TCAGT | LA-021_25_Hlobatus_5L1 | 16643 | 0 | 16643 | 0.0089497 | 0.0208333 | -0.0118836 |
31 | GCCGT | LA-003_04_Hlobatus_5L1 | 23779 | 0 | 23779 | 0.0127870 | 0.0208333 | -0.0080463 |
34 | GGCCA | LA-003_19_Hlobatus_5L1 | 23811 | 0 | 23811 | 0.0128043 | 0.0208333 | -0.0080291 |
4 | TCGAT | CA-015_18_Hlobatus_5L1 | 23823 | 0 | 23823 | 0.0128107 | 0.0208333 | -0.0080226 |
15 | ATACG | CA-053_21_Hlobatus_5L1 | 24705 | 0 | 24705 | 0.0132850 | 0.0208333 | -0.0075483 |
7 | GGTTG | CA-015_33_Hlobatus_5L1 | 25299 | 0 | 25299 | 0.0136044 | 0.0208333 | -0.0072289 |
2 | AACCA | CA-015_09_Hlobatus_5L1 | 25959 | 0 | 25959 | 0.0139593 | 0.0208333 | -0.0068740 |
33 | GGATA | LA-003_14_Hlobatus_5L1 | 26699 | 0 | 26699 | 0.0143573 | 0.0208333 | -0.0064761 |
13 | ACTGG | CA-053_11_Hlobatus_5L1 | 28110 | 0 | 28110 | 0.0151160 | 0.0208333 | -0.0057173 |
17 | ATTAC | CA-053_27_Hlobatus_5L1 | 28583 | 0 | 28583 | 0.0153704 | 0.0208333 | -0.0054630 |
32 | GCTGA | LA-003_09_Hlobatus_5L1 | 31696 | 0 | 31696 | 0.0170444 | 0.0208333 | -0.0037890 |
6 | CAACC | CA-015_25_Hlobatus_5L1 | 32136 | 0 | 32136 | 0.0172810 | 0.0208333 | -0.0035524 |
12 | ACGGT | CA-053_06_Hlobatus_5L1 | 35051 | 0 | 35051 | 0.0188485 | 0.0208333 | -0.0019848 |
19 | CGAAT | CA-053_31_Hlobatus_5L1 | 35114 | 0 | 35114 | 0.0188824 | 0.0208333 | -0.0019509 |
29 | GAGAT | CA-071_49_Hlobatus_5L1 | 35139 | 1 | 35139 | 0.0188958 | 0.0208333 | -0.0019375 |
16 | ATGAG | CA-053_22_Hlobatus_5L1 | 36064 | 0 | 36064 | 0.0193933 | 0.0208333 | -0.0014401 |
27 | CTTGG | CA-071_40_Hlobatus_5L1 | 36150 | 0 | 36150 | 0.0194395 | 0.0208333 | -0.0013938 |
28 | GACAC | CA-071_44_Hlobatus_5L1 | 36471 | 0 | 36471 | 0.0196121 | 0.0208333 | -0.0012212 |
14 | ACTTC | CA-053_18_Hlobatus_5L1 | 38334 | 0 | 38334 | 0.0206139 | 0.0208333 | -0.0002194 |
43 | TCACG | LA-021_20_Hlobatus_5L1 | 38639 | 0 | 38639 | 0.0207779 | 0.0208333 | -0.0000554 |
42 | TATAC | LA-021_15_Hlobatus_5L1 | 38694 | 0 | 38694 | 0.0208075 | 0.0208333 | -0.0000258 |
20 | CGGCT | CA-053_38_Hlobatus_5L1 | 39421 | 0 | 39421 | 0.0211985 | 0.0208333 | 0.0003651 |
5 | TGCAT | CA-015_22_Hlobatus_5L1 | 39673 | 0 | 39673 | 0.0213340 | 0.0208333 | 0.0005006 |
24 | CTGAT | CA-071_23_Hlobatus_5L1 | 40079 | 0 | 40079 | 0.0215523 | 0.0208333 | 0.0007190 |
48 | TTACC | LA-021_60_Hlobatus_5L1 | 41209 | 0 | 41209 | 0.0221600 | 0.0208333 | 0.0013266 |
22 | CGTAC | CA-071_08_Hlobatus_5L1 | 41537 | 0 | 41537 | 0.0223363 | 0.0208333 | 0.0015030 |
8 | AAGGA | CA-026_03_Hlobatus_5L1 | 41720 | 0 | 41720 | 0.0224347 | 0.0208333 | 0.0016014 |
26 | CTGTC | CA-071_35_Hlobatus_5L1 | 42273 | 0 | 42273 | 0.0227321 | 0.0208333 | 0.0018988 |
9 | AGCTA | CA-026_10_Hlobatus_5L1 | 42972 | 0 | 42972 | 0.0231080 | 0.0208333 | 0.0022747 |
39 | TACCG | LA-003_44_Hlobatus_5L1 | 43624 | 0 | 43624 | 0.0234586 | 0.0208333 | 0.0026253 |
46 | TCTGC | LA-021_35_Hlobatus_5L1 | 44578 | 0 | 44578 | 0.0239716 | 0.0208333 | 0.0031383 |
25 | CTGCG | CA-071_30_Hlobatus_5L1 | 45102 | 0 | 45102 | 0.0242534 | 0.0208333 | 0.0034201 |
10 | ACACA | CA-026_11_Hlobatus_5L1 | 45523 | 0 | 45523 | 0.0244798 | 0.0208333 | 0.0036464 |
41 | TAGTA | LA-021_10_Hlobatus_5L1 | 45578 | 0 | 45578 | 0.0245094 | 0.0208333 | 0.0036760 |
36 | GTAGT | LA-003_28_Hlobatus_5L1 | 45779 | 0 | 45779 | 0.0246174 | 0.0208333 | 0.0037841 |
1 | GCATG | CA-015_03_Hlobatus_5L1 | 45790 | 0 | 45790 | 0.0246234 | 0.0208333 | 0.0037900 |
21 | CGGTA | CA-053_50_Hlobatus_5L1 | 45972 | 0 | 45972 | 0.0247212 | 0.0208333 | 0.0038879 |
38 | GTCGA | LA-003_39_Hlobatus_5L1 | 46456 | 0 | 46456 | 0.0249815 | 0.0208333 | 0.0041482 |
11 | AATTA | CA-053_03_Hlobatus_5L1 | 46512 | 0 | 46512 | 0.0250116 | 0.0208333 | 0.0041783 |
18 | CATAT | CA-053_29_Hlobatus_5L1 | 46878 | 0 | 46878 | 0.0252084 | 0.0208333 | 0.0043751 |
35 | GGCTC | LA-003_23_Hlobatus_5L1 | 48701 | 0 | 48701 | 0.0261887 | 0.0208333 | 0.0053554 |
47 | TGGAA | LA-021_49_Hlobatus_5L1 | 49199 | 0 | 49199 | 0.0264565 | 0.0208333 | 0.0056232 |
23 | CGTCG | CA-071_17_Hlobatus_5L1 | 49475 | 0 | 49475 | 0.0266050 | 0.0208333 | 0.0057716 |
40 | TACGT | LA-021_05_Hlobatus_5L1 | 49567 | 0 | 49567 | 0.0266544 | 0.0208333 | 0.0058211 |
30 | GAGTC | CA-071_58_Hlobatus_5L1 | 49586 | 0 | 49586 | 0.0266646 | 0.0208333 | 0.0058313 |
37 | GTCCG | LA-003_33_Hlobatus_5L1 | 54283 | 0 | 54283 | 0.0291904 | 0.0208333 | 0.0083571 |
45 | TCCGG | LA-021_30_Hlobatus_5L1 | 71005 | 0 | 71005 | 0.0381826 | 0.0208333 | 0.0173493 |